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Class: Person

Administrative information about an individual or animal receiving care or other health-related services.

URI: bdchm:Person

classDiagram class Person Entity <|-- Person Person : age_at_death Person : breed Person --> VertebrateBreedEnum : breed Person : cause_of_death Person : id Person : identity Person --> Identifier : identity Person : species Person --> CellularOrganismSpeciesEnum : species Person : vital_status Person --> VitalStatusEnum : vital_status Person : year_of_birth Person : year_of_death

Inheritance

Slots

Name Cardinality and Range Description Inheritance
identity 0..*
Identifier
A 'business' identifier or accession number for the entity, typically as prov... direct
species 0..1
CellularOrganismSpeciesEnum
The scientific binomial name for the species of the Person (e direct
breed 0..1
VertebrateBreedEnum
A label given to a group of animals homogeneous in appearance and other chara... direct
year_of_birth 0..1
Integer
Numeric value to represent the calendar year in which an individual was born direct
vital_status 0..1
VitalStatusEnum
Coded value indicating the state or condition of being living or deceased; al... direct
age_at_death 0..1
Integer
The age of an individual at the time of death, expressed in days since birth direct
year_of_death 0..1
Integer
Numeric value to represent the calendar year in which an individual died direct
cause_of_death 0..1
String
Coded value indicating the circumstance or condition that results in the deat... direct
id 1..1
Uriorcurie
The 'logical' identifier of the entity within the system of record Entity

Usages

used by used in type used
Participant associated_person range Person

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/nhlbidatastage/bdchm

Mappings

Mapping Type Mapped Value
self bdchm:Person
native bdchm:Person

LinkML Source

Direct

name: Person
description: Administrative information about an individual or animal receiving care
  or other health-related services.
from_schema: https://w3id.org/nhlbidatastage/bdchm
is_a: Entity
slots:
- identity
attributes:
  species:
    name: species
    description: The scientific binomial name for the species of the Person (e.g.
      Homo sapiens, Mus musculus, etc.). Values should be derived from the NCBI organismal
      taxonomy (http://purl.obolibrary.org/obo/ncbitaxon.owl).
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    range: CellularOrganismSpeciesEnum
  breed:
    name: breed
    description: A label given to a group of animals homogeneous in appearance and
      other characteristics that distinguish it from other animals of the same species.
      Values should be derived from the Vertebrate Breed Ontology (http://purl.obolibrary.org/obo/vbo.owl).
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    range: VertebrateBreedEnum
  year_of_birth:
    name: year_of_birth
    description: Numeric value to represent the calendar year in which an individual
      was born.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    range: integer
  vital_status:
    name: vital_status
    description: Coded value indicating the state or condition of being living or
      deceased; also includes the case where the vital status is unknown.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    range: VitalStatusEnum
  age_at_death:
    name: age_at_death
    description: The age of an individual at the time of death, expressed in days
      since birth
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    range: integer
    unit:
      ucum_code: d
  year_of_death:
    name: year_of_death
    description: Numeric value to represent the calendar year in which an individual
      died.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    range: integer
  cause_of_death:
    name: cause_of_death
    description: Coded value indicating the circumstance or condition that results
      in the death of the individual.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    range: string

Induced

name: Person
description: Administrative information about an individual or animal receiving care
  or other health-related services.
from_schema: https://w3id.org/nhlbidatastage/bdchm
is_a: Entity
attributes:
  species:
    name: species
    description: The scientific binomial name for the species of the Person (e.g.
      Homo sapiens, Mus musculus, etc.). Values should be derived from the NCBI organismal
      taxonomy (http://purl.obolibrary.org/obo/ncbitaxon.owl).
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: species
    owner: Person
    domain_of:
    - Person
    range: CellularOrganismSpeciesEnum
  breed:
    name: breed
    description: A label given to a group of animals homogeneous in appearance and
      other characteristics that distinguish it from other animals of the same species.
      Values should be derived from the Vertebrate Breed Ontology (http://purl.obolibrary.org/obo/vbo.owl).
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: breed
    owner: Person
    domain_of:
    - Person
    range: VertebrateBreedEnum
  year_of_birth:
    name: year_of_birth
    description: Numeric value to represent the calendar year in which an individual
      was born.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: year_of_birth
    owner: Person
    domain_of:
    - Person
    range: integer
  vital_status:
    name: vital_status
    description: Coded value indicating the state or condition of being living or
      deceased; also includes the case where the vital status is unknown.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: vital_status
    owner: Person
    domain_of:
    - Person
    range: VitalStatusEnum
  age_at_death:
    name: age_at_death
    description: The age of an individual at the time of death, expressed in days
      since birth
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: age_at_death
    owner: Person
    domain_of:
    - Person
    range: integer
    unit:
      ucum_code: d
  year_of_death:
    name: year_of_death
    description: Numeric value to represent the calendar year in which an individual
      died.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: year_of_death
    owner: Person
    domain_of:
    - Person
    range: integer
  cause_of_death:
    name: cause_of_death
    description: Coded value indicating the circumstance or condition that results
      in the death of the individual.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: cause_of_death
    owner: Person
    domain_of:
    - Person
    range: string
  identity:
    name: identity
    description: A 'business' identifier or accession number for the entity, typically
      as provided by an external system or authority, that are globally unique and
      persist across implementing systems. Also, since these identifiers are created
      outside the information system through a specific business process, the Identifier
      type has additional attributes to capture this additional metadata so the actual
      identifier values are qualified by the context that created those values. This
      additional context allows "identifier" instances to be transmitted as business
      data across systems while still being able to trace them back to the system
      of origin.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    slot_uri: schema:identifier
    multivalued: true
    alias: identity
    owner: Person
    domain_of:
    - Person
    - Demography
    - Participant
    - ResearchStudy
    - Organization
    - Questionnaire
    - QuestionnaireItem
    - Condition
    - Document
    - Specimen
    - BiologicProduct
    range: Identifier
  id:
    name: id
    description: The 'logical' identifier of the entity within the system of record.  The
      simple value of this attribute stands for an identifier of this data object
      within the system, it can be used as a reference from other objects within the
      same system (i.e. primary and foreign keys), and it should be unique per type
      of object. The same data object copied to a different system will likely have
      a different "id" in the new system since "id" values are system specific and
      do not represent persistent business identifiers. Business identifiers are assigned
      outside the information system and are captured in the "identifier" field. The
      "id" field is more likely to be a serially or randomly generated value that
      is assigned to the data object as it is created in a system.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: Person
    domain_of:
    - Entity
    range: uriorcurie
    required: true