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Class: ImagingStudy

An ImagingStudy is a set of images produced in a single study (one or more series of references images). It may include images from different modalities (e.g. CT, MR, Ultrasound) and from different instances in time. The ImagingStudy may be linked to other information such as the clinical context in which the images were acquired.

URI: bdchm:ImagingStudy

classDiagram class ImagingStudy click ImagingStudy href "../ImagingStudy" Entity <|-- ImagingStudy click Entity href "../Entity" ImagingStudy : age_at_imaging_study ImagingStudy : associated_participant ImagingStudy --> "0..1" Participant : associated_participant click Participant href "../Participant" ImagingStudy : associated_visit ImagingStudy --> "0..1" Visit : associated_visit click Visit href "../Visit" ImagingStudy : body_part_examined ImagingStudy --> "0..1" BodySite : body_part_examined click BodySite href "../BodySite" ImagingStudy : id ImagingStudy : number_of_instances ImagingStudy : number_of_series ImagingStudy : study_description ImagingStudy : study_modality ImagingStudy : study_uid

Inheritance

Slots

Name Cardinality and Range Description Inheritance
associated_visit 0..1
Visit		 A reference to the Visit that is associated with this record direct
associated_participant 0..1
Participant		 A reference to the Participant that is associated with this record direct
age_at_imaging_study 0..1
Integer		 The Participant's age (expressed in days) when the ImagingStudy was performed direct
number_of_series 0..1
Integer		 Number of Series in the Study direct
number_of_instances 0..1
Integer		 Number of SOP Instances in Study direct
study_description 0..1
String		 (0008, 1030) Study Description direct
study_modality 0..1
String		 The modalities of the imaging study; derived from (0008, 0060) Modality direct
study_uid 0..1
String		 (0020, 000d) Study Instance UID direct
body_part_examined 0..1
BodySite		 (0018, 0015) Body Part Examined direct
id 1
Uriorcurie		 The 'logical' identifier of the entity within the system of record Entity

Usages

used by used in type used
ImagingFile related_imaging_study range ImagingStudy

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/nhlbidatastage/bdchm

Mappings

Mapping Type Mapped Value
self bdchm:ImagingStudy
native bdchm:ImagingStudy

LinkML Source

Direct

name: ImagingStudy
description: An ImagingStudy is a set of images produced in a single study (one or
  more series of references images).  It may include images from different modalities
  (e.g. CT, MR, Ultrasound) and from different instances in time.  The ImagingStudy
  may be linked to other information such as the clinical context in which the images
  were acquired.
from_schema: https://w3id.org/nhlbidatastage/bdchm
is_a: Entity
slots:
- associated_visit
- associated_participant
attributes:
  age_at_imaging_study:
    name: age_at_imaging_study
    description: The Participant's age (expressed in days) when the ImagingStudy was
      performed.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingStudy
    range: integer
    unit:
      ucum_code: d
  number_of_series:
    name: number_of_series
    description: Number of Series in the Study.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingStudy
    range: integer
  number_of_instances:
    name: number_of_instances
    description: Number of SOP Instances in Study.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingStudy
    range: integer
  study_description:
    name: study_description
    description: (0008, 1030) Study Description. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingStudy
    range: string
  study_modality:
    name: study_modality
    description: The modalities of the imaging study; derived from (0008, 0060) Modality.
      The Digital Imaging and Communications in Medicine (DICOM) standard is the international
      standard to transmit, store, retrieve, print, process, and display medical imaging
      information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingStudy
    range: string
  study_uid:
    name: study_uid
    description: (0020, 000d) Study Instance UID. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingStudy
    range: string
  body_part_examined:
    name: body_part_examined
    description: (0018, 0015) Body Part Examined. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingStudy
    range: BodySite

Induced

name: ImagingStudy
description: An ImagingStudy is a set of images produced in a single study (one or
  more series of references images).  It may include images from different modalities
  (e.g. CT, MR, Ultrasound) and from different instances in time.  The ImagingStudy
  may be linked to other information such as the clinical context in which the images
  were acquired.
from_schema: https://w3id.org/nhlbidatastage/bdchm
is_a: Entity
attributes:
  age_at_imaging_study:
    name: age_at_imaging_study
    description: The Participant's age (expressed in days) when the ImagingStudy was
      performed.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: age_at_imaging_study
    owner: ImagingStudy
    domain_of:
    - ImagingStudy
    range: integer
    unit:
      ucum_code: d
  number_of_series:
    name: number_of_series
    description: Number of Series in the Study.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: number_of_series
    owner: ImagingStudy
    domain_of:
    - ImagingStudy
    range: integer
  number_of_instances:
    name: number_of_instances
    description: Number of SOP Instances in Study.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: number_of_instances
    owner: ImagingStudy
    domain_of:
    - ImagingStudy
    range: integer
  study_description:
    name: study_description
    description: (0008, 1030) Study Description. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: study_description
    owner: ImagingStudy
    domain_of:
    - ImagingStudy
    range: string
  study_modality:
    name: study_modality
    description: The modalities of the imaging study; derived from (0008, 0060) Modality.
      The Digital Imaging and Communications in Medicine (DICOM) standard is the international
      standard to transmit, store, retrieve, print, process, and display medical imaging
      information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: study_modality
    owner: ImagingStudy
    domain_of:
    - ImagingStudy
    range: string
  study_uid:
    name: study_uid
    description: (0020, 000d) Study Instance UID. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: study_uid
    owner: ImagingStudy
    domain_of:
    - ImagingStudy
    range: string
  body_part_examined:
    name: body_part_examined
    description: (0018, 0015) Body Part Examined. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: body_part_examined
    owner: ImagingStudy
    domain_of:
    - ImagingStudy
    range: BodySite
  associated_visit:
    name: associated_visit
    description: A reference to the Visit that is associated with this record.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: associated_visit
    owner: ImagingStudy
    domain_of:
    - Demography
    - QuestionnaireResponse
    - Condition
    - Procedure
    - ImagingStudy
    - Exposure
    - ObservationSet
    - Observation
    range: Visit
  associated_participant:
    name: associated_participant
    description: A reference to the Participant that is associated with this record.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: associated_participant
    owner: ImagingStudy
    domain_of:
    - Demography
    - Visit
    - Condition
    - Procedure
    - ImagingStudy
    - Exposure
    - File
    - ObservationSet
    - Observation
    range: Participant
  id:
    name: id
    description: The 'logical' identifier of the entity within the system of record.  The
      simple value of this attribute stands for an identifier of this data object
      within the system, it can be used as a reference from other objects within the
      same system (i.e. primary and foreign keys), and it should be unique per type
      of object. The same data object copied to a different system will likely have
      a different "id" in the new system since "id" values are system specific and
      do not represent persistent business identifiers. Business identifiers are assigned
      outside the information system and are captured in the "identifier" field. The
      "id" field is more likely to be a serially or randomly generated value that
      is assigned to the data object as it is created in a system.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: ImagingStudy
    domain_of:
    - Entity
    range: uriorcurie
    required: true