Class: ImagingFile

name: ImagingFile
description: A file that contains diagnostic imaging data, such as a DICOM file, or
  a JPEG or PNG image.
from_schema: https://w3id.org/nhlbidatastage/bdchm
is_a: File
attributes:
  imaging_modality:
    name: imaging_modality
    description: The modality of the imaging data contained in the file (e.g. CT,
      MRI, etc.)
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingFile
    range: string
  anatomical_site:
    name: anatomical_site
    description: The anatomical site from which the imaging data was acquired (e.g.
      Chest, Abdomen, etc.)
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingFile
    range: BodySite
  series_number:
    name: series_number
    description: The Series Instance Number for the imaging data contained in the
      file, if applicable.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingFile
    range: integer
  series_uid:
    name: series_uid
    description: (0020, 000e) Series Instance UID. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingFile
    range: string
  series_description:
    name: series_description
    description: (0008, 103e) Series Description. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingFile
    range: string
  related_imaging_study:
    name: related_imaging_study
    description: The ImagingStudy with which this ImagingFile is associated.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingFile
    range: ImagingStudy
  manufacturer:
    name: manufacturer
    description: (0008, 0070) Manufacturer. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingFile
    range: string
  manufacturer_model:
    name: manufacturer_model
    description: (0008, 1090) Manufacturer's Model Name. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    domain_of:
    - ImagingFile
    range: string

name: ImagingFile
description: A file that contains diagnostic imaging data, such as a DICOM file, or
  a JPEG or PNG image.
from_schema: https://w3id.org/nhlbidatastage/bdchm
is_a: File
attributes:
  imaging_modality:
    name: imaging_modality
    description: The modality of the imaging data contained in the file (e.g. CT,
      MRI, etc.)
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: imaging_modality
    owner: ImagingFile
    domain_of:
    - ImagingFile
    range: string
  anatomical_site:
    name: anatomical_site
    description: The anatomical site from which the imaging data was acquired (e.g.
      Chest, Abdomen, etc.)
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: anatomical_site
    owner: ImagingFile
    domain_of:
    - ImagingFile
    range: BodySite
  series_number:
    name: series_number
    description: The Series Instance Number for the imaging data contained in the
      file, if applicable.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: series_number
    owner: ImagingFile
    domain_of:
    - ImagingFile
    range: integer
  series_uid:
    name: series_uid
    description: (0020, 000e) Series Instance UID. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: series_uid
    owner: ImagingFile
    domain_of:
    - ImagingFile
    range: string
  series_description:
    name: series_description
    description: (0008, 103e) Series Description. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: series_description
    owner: ImagingFile
    domain_of:
    - ImagingFile
    range: string
  related_imaging_study:
    name: related_imaging_study
    description: The ImagingStudy with which this ImagingFile is associated.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: related_imaging_study
    owner: ImagingFile
    domain_of:
    - ImagingFile
    range: ImagingStudy
  manufacturer:
    name: manufacturer
    description: (0008, 0070) Manufacturer. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: manufacturer
    owner: ImagingFile
    domain_of:
    - ImagingFile
    range: string
  manufacturer_model:
    name: manufacturer_model
    description: (0008, 1090) Manufacturer's Model Name. The Digital Imaging and Communications
      in Medicine (DICOM) standard is the international standard to transmit, store,
      retrieve, print, process, and display medical imaging information.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: manufacturer_model
    owner: ImagingFile
    domain_of:
    - ImagingFile
    range: string
  identity:
    name: identity
    description: A 'business' identifier or accession number for the entity, typically
      as provided by an external system or authority, that are globally unique and
      persist across implementing systems. Also, since these identifiers are created
      outside the information system through a specific business process, the Identifier
      type has additional attributes to capture this additional metadata so the actual
      identifier values are qualified by the context that created those values. This
      additional context allows "identifier" instances to be transmitted as business
      data across systems while still being able to trace them back to the system
      of origin.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    slot_uri: schema:identifier
    alias: identity
    owner: ImagingFile
    domain_of:
    - Person
    - Demography
    - Participant
    - ResearchStudy
    - Organization
    - Questionnaire
    - QuestionnaireItem
    - Condition
    - Procedure
    - Exposure
    - File
    - Document
    - Specimen
    - BiologicProduct
    range: uriorcurie
    multivalued: true
  associated_participant:
    name: associated_participant
    description: A reference to the Participant that is associated with this record.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: associated_participant
    owner: ImagingFile
    domain_of:
    - Demography
    - Visit
    - Condition
    - Procedure
    - ImagingStudy
    - Exposure
    - File
    - ObservationSet
    - Observation
    range: Participant
  file_name:
    name: file_name
    description: The name (or part of a name) of a file (of any type).
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: file_name
    owner: ImagingFile
    domain_of:
    - File
    range: string
  file_size:
    name: file_size
    description: The size of the data file (object) in bytes.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: file_size
    owner: ImagingFile
    domain_of:
    - File
    range: integer
  file_location:
    name: file_location
    description: A unique identifier or url for identifying or locating the file.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: file_location
    owner: ImagingFile
    domain_of:
    - File
    range: uriorcurie
    multivalued: true
  md5sum:
    name: md5sum
    description: The 128-bit hash value expressed as a 32 digit hexadecimal number
      used as a file's digital fingerprint.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: md5sum
    owner: ImagingFile
    domain_of:
    - File
    range: string
  data_type:
    name: data_type
    description: The nature or genre of the resource. Recommended best practice is
      to use a controlled vocabulary such as the DCMI Type Vocabulary [DCMI-TYPE](https://www.dublincore.org/specifications/dublin-core/dcmi-terms/#section-7).
      To describe the file format, physical medium, or dimensions of the resource,
      use the Format element.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: data_type
    owner: ImagingFile
    domain_of:
    - File
    range: string
  data_category:
    name: data_category
    description: A broad categorization of the contents of the data file.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: data_category
    owner: ImagingFile
    domain_of:
    - File
    range: string
  format:
    name: format
    description: The file format, physical medium, or dimensions of the resource.
      Examples of dimensions include size and duration. Recommended best practice
      is to use a controlled vocabulary such as the list of Internet Media Types [MIME]
      (http://www.iana.org/assignments/media-types/).
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: format
    owner: ImagingFile
    domain_of:
    - File
    range: string
  description:
    name: description
    description: An account of the resource. Description may include but is not limited
      to an abstract, a table of contents, a graphical representation, or a free-text
      account of the resource.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    alias: description
    owner: ImagingFile
    domain_of:
    - Participant
    - ResearchStudy
    - Questionnaire
    - File
    - Document
    - Specimen
    - BiologicProduct
    range: string
  derived_from:
    name: derived_from
    description: A File from which this File is derived.  A derivation is a transformation
      of an entity into another, an update of an entity resulting in a new one, or
      the construction of a new entity based on a pre-existing entity.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    alias: derived_from
    owner: ImagingFile
    domain_of:
    - File
    range: File
  id:
    name: id
    description: The 'logical' identifier of the entity within the system of record.  The
      simple value of this attribute stands for an identifier of this data object
      within the system, it can be used as a reference from other objects within the
      same system (i.e. primary and foreign keys), and it should be unique per type
      of object. The same data object copied to a different system will likely have
      a different "id" in the new system since "id" values are system specific and
      do not represent persistent business identifiers. Business identifiers are assigned
      outside the information system and are captured in the "identifier" field. The
      "id" field is more likely to be a serially or randomly generated value that
      is assigned to the data object as it is created in a system.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: ImagingFile
    domain_of:
    - Entity
    range: uriorcurie
    required: true